Image Treatment and Analysis in Microscopy

26 May 2025

Sylvain Loubéry, Dr., UNIGE

Sylvain Loubéry, Dr., UNIGE

Images produced in microscopy need to be treated adequately so that they can be exploited. In many instances, measurements and quantifications can (and should) be performed on these images.

The objective of the course is to give participants keys to perform these operations as efficiently as possible, focusing on the use of the open-source software Fiji.

The course is accessible to beginners. The pre-requisites are to have (even minimal) experience in microscopy, and to come to the course with a laptop that can run Fiji (i.e.not extremely outdated and with at least 2GB of RAM).

The first day of the course includes short lectures and guided exercises on the following topics:
- ethics in image manipulation;
- processing and presentation of images;
- measurements; colocalization analysis;
- segmentation;
- writing macros to (semi-)automate processing steps

> Flyer (PDF)

> Program (PDF)

University of Geneva, building Sciences III Room 0059

The course is organized in collaboration with the Doctoral School in Life Sciences of Neuchâtel (DSLS)

Reimbursements for CUSO MPS Students:Train ticket, 2°class, half-fare from your institution to the place of the activity

Reimbursement of your travel tickets can be asked online through your MyCUSO. See HERE for the procedure.

For any question concerning reimbursement please contact the CUSO MPS coordinator Debora Zoia
Reimbursement for DSLS Students: please contact the DSLS coordinator Emilie Genty

REGISTRATION IS CLOSE

- Maximum number of participants: 12 people (minimum 6)
- 6 places available for CUSO MPS students, 6 places available for DSLS students
- A waiting list will be prepared to ensure that there are no empty seats

Deadline for registration: TBA

*For cancellations after the deadline of registration or no-show: 50 CHF administrative fee

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