Detailed information about the course
| Title | BEFRI Genomics Day |
| Dates | 21 June 2024 |
| Lang |
Workshop language is English |
| Responsable de l'activité | Rémy Bruggmann |
| Organizer(s) | Prof. Rémy Bruggmann, UNIBE |
| Speakers | PhD student: Michael Ammeter, DBMR, UNIBE Prof. Hugues Abriel, IBMM, UNIBE
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| Description | The field of Genomics continues to grow in importance and new techniques emerge regularly both to produce data and to analyze data. We will invite several local and foreign speakers to present their methods and results. Selected PhD students will present shortly their projects. All CUSO PhD students will be invited to have lunch with the speakers. |
| Program | The last version of the program is on: https://www.bioinformatics.unibe.ch/research/events/index_eng.html BEFRI Genomics Day 2024 Friday, June 21 Unitobler, room F 021, Lerchenweg 36, University of Bern Organisation: PD Dr. Rémy Bruggmann, Interfaculty Bioinformatics Unit | IBU Many thanks for your registration before June 14: https://forms.gle/Rb2QAxKzG7AxWvEJ7 In case of questions, please contact Jolanda Paganoni Zurbrügg.
09:15 Opening Words 09:20 Pamela Nicholson, NGSP «NGS Platform UniBe/UniFr» 09:35 Geert van Geest, IBU «Bioinformatics Platform UniBe» 09:50 Catherine Peichel, IEE «The role of genome evolution in adaptation and speciation» 10:15 Carsten Riether, DBMR «Spatial transcripomic analysis of resistance mechanisms in head and neck cancer» 10:40 Coffee Break 10:55 Anna Oevermann, Vetsuisse «Deciphering the host-pathogen tango between Listeria monocytogenes and phagocytes using omics approaches» 11:20 Florian Aeschimann, CSL Behring «Analysis of lentivirus-host genome fusion transcripts to derive splicing-free insulators» 11:45 Hugues Abriel, IBMM «Rare Diseases on the African Continent: Initial Insights from Nanopore Sequencing Techniques» 12:10 Anne Gregor, DBMR «Modelling LHX2-associated neurodevelopmental disorder in human brain organoids»
12:35 Lunch in the foyer
Program Afternoon 13:30 Selected PhD student presentations Jan Franzen, Vetsuisse «Clostridium perfringens. Beyond Known Virulence Factors: Do We Know All Its Deadly Secrets?» Daniel Hanhart, DBMR «Accurate, fast and interpretable cross-modality prediction in scRNA-seq data» Dominique Vuarambon, IPS «mRNA stability in response to short exposure to warm temperatures in Arabidopsis» Michael Ammeter, DBMR «Deciphering the spatial heterogeneity of interstitial lung disease by integrative radiomics and single-nucleus transcriptomic profiling» Benjamin Grädel, ICB «Detection and Quantification of Spatiotemporal Correlations in Cell Signaling» 15:00 Coffee Break 15:15 Alumni Talks: - Judith Bergadà, Postdoctoral Scientist, University Hospital Zürich - Tim Ogi, Data & Software Engineer, OLZ AG - Hira Imeri, Research Scientist, University of Zürich 16:15 Poster session with research groups from UniBE and UniFR accompanied by an apéro (registration needed, see link above) |
| Location |
UNIBE, Unitobler, room F 021, Lerchenweg 36 |
| Information | BEFRI Genomics Day 2024
The program is now available. It will take place on June 21 at the University of Bern, room F 021 at Lerchenweg 36. |
| Registration | https://forms.gle/uRgixHf9Hhmdi4fd6 before June 14, 2024 |
| Places | 80 |
| Deadline for registration | 14.06.2024 |
| Contact | In case of questions, please contact Jolanda Paganoni Zurbrügg. |
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