Detailed information about the course

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Title

Lausanne Genomics Days 2020

Dates

10-11 February 2020

Lang EN Workshop language is English
Organizer(s)

Dr. Julien Marquis, UNIL

Prof. Julia Santiago Cuellar, UNIL

Prof. Philipp Engel, UNIL

Prof. Tanja Schwander, UNIL

Prof. Sven Bergmann, UNIL

 

Speakers

Prof. Martin Jinek

Dr. Robertas Ursache (Prof. Niko Geldner lab)

Dr. Lotte Spel (Prof. Fabio Martinon lab)

Prof Detlev Arendt

Prof. Anne Roulin

Prof. Stefan Ameres

Dr. Flora Brozzi (Prof. Romano Regazzi lab)

Dr. Rodrigo Siqueira Reis (Prof. Yves Poirier lab)

Lina Worpenberg (Prof. Jean Yves Roignant lab)

Prof. Colin Hill

Dr. Kirsten Ellegaard (Prof. Philipp Engel lab)

Paddy Gibson (Prof. Jan-Willem Veening lab)

Prof. Guillem Salazar Guiral

Prof. Tamir Tuller

Dr. Anneke Brümmer (Prof. Sven Bergman group)

Dr. Cedric Gobet (Prof. Felix Naef lab)

Prof. David Gatfield

 

Description
Program

Download the poster

 

Monday February 10, 2020

 

09:30-10:00 Welcome and coffee in the Génopode hall

 


10:00-11:45 Translation regulation session

Session's chaiperson

Prof. Sven Bergmann - UNIL: Department of Computational Biology


Keynote presentation speaker

10:00 Prof. Tamir Tuller - Tel Aviv University, Israel

Computational deciphering and modelling of novel gene expression rules encoded in the mRNA


Local speakers

10:45 Dr. Anneke Brümmer (Prof. Sven Bergman group) - UNIL: Department of Computational Biology

LincRNA sequences are biased to counteract their translation

11:00 Dr. Cédric Gobet (Prof. Felix Naef lab) - EPFL

Modeling ribosome dwell times and relationships with aminoacyl-tRNAs in mouse liver

11:25 Prof. David Gatfield - UNIL: Center for Integrative Genomics

Transcriptome-wide sites of collided ribosomes reveal sequence determinants of translational pausing


11:45-13:00 Lunch in the Génopode hall


13:00-14:45 RNA processing session

Session's chaiperson

Dr. Julien Marquis - UNIL: Genomics Facility


Keynote presentation speaker

13:00 Prof. Stefan Ameres - Institute of Molecular Biotechnology, Austria

SLAMseq – Dissecting gene regulatory mechanisms by time-resolved RNA sequencing


Local speakers

13:45 Dr. Flora Brozzi (Prof. Romano Regazzi lab) - Department of Fundamental Neurosciences (DNF)

RNA-tagging to unveil beta-cell/immune cell crosstalk in diabetes pathogenesis

14:05 Dr. Rodrigo Siqueira Reis (Prof. Yves Poirier lab) - UNIL: Department of Plant Molecular Biology

Complex mRNA-antisense lncRNA interaction revealed by SHAPE-MaP

14:25 Lina Worpenberg (Prof. Jean Yves Roignant lab) - UNIL: Center for Integrative Genomics

Shaping the nervous system by m6A mRNA modification


14:45-15:15 Coffee break in the Génopode hall


15:15-16:55 Gene editing session

Session's chaiperson

Prof. Julia Santiago Cuellar - UNIL: Department of Plant Molecular Biology


Keynote presentation speaker

15:15 Prof. Martin Jinek - University of Zurich, Switzerland

Molecular mechanisms of genome editors


Local speakers

15:55 Dr. Robertas Ursache (Prof. Niko Geldner lab) - UNIL: Department of Plant Molecular Biology

CRISPR and the new age of genetic analysis in Arabidopsis

16:20 Dr. Lotte Spel (Prof. Fabio Martinon lab) - UNIL: Department of Biochemistry

A functional genetics approach to dissect inflammasome activation


16:45 Apéro in the Génopode hall

 

 

 

Tuesday February 11, 2020

 

09:30-10:00 Welcome and coffee in the Génopode hall

 


10:00-11:45 Microbiome analysis session

Session's chaiperson

Prof. Philipp Engel - UNIL: Department of Fundamental microbiology


Keynote presentation speaker

10:00 Prof. Colin Hill - University College Cork, Ireland

A voyage through the gut virome


Local speakers

10:45 Dr. Kirsten Ellegaard (Prof. Philipp Engel lab) - UNIL: Department of Fundamental microbiology

Getting quantitative on the Microbiome: vast differences in strain-level diversity among host-associated bacterial communities

11:05 Paddy Gibson (Prof. Jan-Willem Veening lab) - UNIL: Department of Fundamental microbiology

Deciphering the origins of amoxicillin resistance in Streptococcus pneumoniae through experimental evolution and NGS

11:25 Prof. Guillem Salazar Guiral - ETH: Microbiology

Disentangling the effects of gene expression changes and community turnover in the global ocean


11:45-13:30 Lunch in the Génopode hall


13:30-15:15 Evolution Session

Session's chaiperson

Prof. Tanja Schwander - UNIL: Department of Ecology and Evolution


Local speakers

13:30 Prof. Anne Roulin - UZH: Department of Plant and Microbial Biology

Transposable element evolution in small genomes What can we learn from population genomics in B. distachyon?

13:50 Jelisaveta Djordjevic - UNIL: Department of Ecology and Evolution

Sexual conflict and the ontogeny of sex-biased gene expression in stick insects

14:10 Tom Kay - UNIL: Department of Ecology and Evolution

Position in the social network is a central driver of behavior and gene expression in ants


Keynote presentation speaker

14:30 Prof Detlev Arendt - EMBL Heidelberg

Evolution of neurons and of the nervous system

 

Location

University of Lausanne, Génopode, Auditorium C

Map

Map

Information
Places

150

Deadline for registration 01.02.2020
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