Detailed information about the course
Title | Computer skills for biological research: introduction to GNU/Linux and bash scripting |
Dates | Feb 10-14, 2025 |
Lang | Workshop language is English |
Responsible | José Manuel NUNES |
Organizer(s) | Dr Jose Manuel Nunes, UNIGE |
Speakers | Dr Mathias Currat, UNIGE |
Description | This course intends to present useful computer tools and techniques for young researchers in biology that substantially extend basic computer knowledge acquired at undergraduate levels. The course concentrates on GNU/Linux environment and tools because it is powerful, free and easy to install in any kind of computer. Moreover, most of the computer clusters available for scientists run Linux. The course is intended for beginners and for more advanced people, its level of complexity increasing through the five days. The first part of the course will consist in learning the basic of GNU/Linux: installation of the environment, useful shell commands to work with text files, simple command lines and the use of regular expressions, pipes, and short scripts. The second part will consist in developing more complex scripts, as well as exercises using a computer cluster. Upon conclusion of the course the attendees are expected to be able to:
The training will provide a minimal theoretical basis in each of the topics listed below and concentrate on practical aspects through numerous applications. It will confer a working autonomy to solve problems while handling data and conducting data analyses pertinent to the researcher in biology. Topics:
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Location |
UNIGE, Sciences II 4-419 |
Information | When? |
Expenses | Travel |
Registration | Deadline for registration: 15.01.2025 |
Places | 8 |
Deadline for registration | 15.01.2025 |